Download grch38 build human variant files

The bit and bit versions can be downloaded here. The utilities directory offers downloads of pre-compiled standalone binaries for:.

For example, you can find the underlying mayZeb1. These links also display under a column titled "UCSC version" on the conservation track description page. Some files in the browser, such as bigBed files, are hosted in binary format. For example, in the hg38 database, the crispr. The bigBedToBed tool can also be used to obtain a specific subset of features within a given range, e. Data on the gbdb fileserver can also be acquired using the rsync commands outline on our FTP downloads page.

This technique is especially useful for downloading large files. For example, the link for the mm5-to-mm6 over. The link to download the liftOver source is located in the Source and utilities downloads section. JavaScript is disabled in your web browser You must have JavaScript enabled in your web browser to use the Genome Browser.

Denisova S. Access source using git Download source code. Multiple alignments of 99 vertebrate genomes with human Conservation scores for alignments of 99 vertebrate genomes with human Basewise conservation scores phyloP of 99 vertebrate genomes with human FASTA alignments of 99 vertebrate genomes with human for CDS regions Multiple alignments of 45 vertebrate genomes with human Conservation scores for alignments of 45 vertebrate genomes with human Basewise conservation scores phyloP of 45 vertebrate genomes with human FASTA alignments of 45 vertebrate genomes with human for CDS regions.

Multiple alignments of 43 vertebrate genomes with human Conservation scores for alignments of 43 vertebrate genomes with human Basewise conservation scores phyloP of 43 vertebrate genomes with human FASTA alignments of 43 vertebrate genomes with human for CDS regions Multiple alignments of 27 vertebrate genomes with human Conservation scores for alignments of 27 vertebrate genomes with human Basewise conservation scores phyloP of 27 vertebrate genomes with human FASTA alignments of 27 vertebrate genomes with human for CDS regions Multiple alignments of 16 vertebrate genomes with human Conservation scores for alignments of 16 vertebrate genomes with human Multiple alignments of 35 vertebrate genomes with human in ENCODE regions.

Multiple alignments of 16 vertebrate genomes with Human Conservation scores for alignments of 16 vertebrate genomes with Human Multiple alignments of 8 vertebrate genomes with Human Conservation scores for alignments of 8 vertebrate genomes with Human. Multiple alignments of 3 vertebrate genomes with Cat Conservation scores for alignments of 3 vertebrate genomes with Cat. Multiple alignments of 77 vertebrate genomes with Chicken Conservation scores for alignments of 77 vertebrate genomes with Chicken Basewise conservation scores phyloP of 77 vertebrate genomes with Chicken.

Multiple alignments of 6 vertebrate genomes with chicken Conservation scores for alignments of 6 vertebrate genomes with chicken. Multiple alignments of 4 vertebrate genomes with Cow Conservation scores for alignments of 4 vertebrate genomes with Cow. SQL table dump annotations Fileserver bigBed, maf, fa, etc annotations. Also see Data Access. Multiple alignments of 3 vertebrate genomes with Dog Conservation scores for alignments of 3 vertebrate genomes with Dog. Multiple alignments of 7 vertebrate genomes with Fugu Conservation scores for alignments of 7 vertebrate genomes with Fugu.

Multiple alignments of 4 vertebrate genomes with Fugu Conservation scores for alignments of 4 vertebrate genomes with Fugu. Multiple alignments of 11 vertebrate genomes with Gorilla Conservation scores for alignments of 11 vertebrate genomes with Gorilla. Multiple alignments of 6 genomes with Lamprey Conservation scores for alignments of 6 genomes with Lamprey. Multiple alignments of 5 genomes with Lamprey Conservation scores for alignments of 5 genomes with Lamprey.

Multiple alignments of 4 genomes with Lancelet Conservation scores for alignments of 4 genomes with Lancelet. Multiple alignments of 5 vertebrate genomes with Malayan flying lemur Conservation scores for alignments of 5 vertebrate genomes with Malyan flying lemur.

Multiple alignments of 8 vertebrate genomes with Marmoset Conservation scores for alignments of 8 vertebrate genomes with Marmoset. Multiple alignments of 4 vertebrate genomes with Medaka Conservation scores for alignments of 4 vertebrate genomes with Medaka. Multiple alignments of 6 vertebrate genomes with the Medium ground finch Conservation scores for alignments of 6 vertebrate genomes with the Medium ground finch Basewise conservation scores phyloP of 6 vertebrate genomes with the Medium ground finch.

Multiple alignments of 59 vertebrate genomes with Mouse Conservation scores for alignments of 59 vertebrate genomes with Mouse Basewise conservation scores phyloP of 59 vertebrate genomes with Mouse FASTA alignments of 59 vertebrate genomes with Mouse for CDS regions.

GRCm38 Patch 6 - Sequence files. Multiple alignments of 29 vertebrate genomes with Mouse Conservation scores for alignments of 29 vertebrate genomes with Mouse Basewise conservation scores phyloP of 29 vertebrate genomes with Mouse FASTA alignments of 29 vertebrate genomes with Mouse for CDS regions.

Multiple alignments of 16 vertebrate genomes with Mouse Conservation scores for alignments of 16 vertebrate genomes with Mouse. Multiple alignments of 9 vertebrate genomes with Mouse Conservation scores for alignments of 9 vertebrate genomes with Mouse.

Multiple alignments of 4 vertebrate genomes with Mouse Conservation scores for alignments of 4 vertebrate genomes with Mouse. Multiple alignments of 8 vertebrate genomes with Opossum Conservation scores for alignments of 8 vertebrate genomes with Opossum.

Multiple alignments of 6 vertebrate genomes with Opossum Conservation scores for alignments of 6 vertebrate genomes with Opossum. Multiple alignments of 7 vertebrate genomes with Orangutan Conservation scores for alignments of 7 vertebrate genomes with Orangutan. Multiple alignments of 5 vertebrate genomes with Platypus Conservation scores for alignments of 5 vertebrate genomes with Platypus. Human Release 38 GRCh Cookies policy Terms of use.

It contains the comprehensive gene annotation on the reference chromosomes only This is the main annotation file for most users.

It contains the comprehensive gene annotation on the reference chromosomes, scaffolds, assembly patches and alternate loci haplotypes This is a superset of the main annotation file. It contains the comprehensive gene annotation on the primary assembly chromosomes and scaffolds sequence regions This is a superset of the main annotation file. It contains the basic gene annotation on the reference chromosomes only This is a subset of the corresponding comprehensive annotation, including only those transcripts tagged as 'basic' in every gene.

It contains the basic gene annotation on the reference chromosomes, scaffolds, assembly patches and alternate loci haplotypes This is a subset of the corresponding comprehensive annotation, including only those transcripts tagged as 'basic' in every gene.

It contains the comprehensive gene annotation of lncRNA genes on the reference chromosomes This is a subset of the main annotation file. Nucleotide sequences of all transcripts on the reference chromosomes.

Nucleotide sequences of long non-coding RNA transcripts on the reference chromosomes.